MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12566-P1

Family name MIR-12566 (all species)
Seed UAAAUGC
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12566-P2  Obi-Mir-12566-P3 
Orthologues Ovu-Mir-12566-P1 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(PRJNA270931_OBI)
KQ417213: 413353-413412 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UACUGGUUCAACAUUAUGAGUAAGAAGGCUUGUGUUUCUUGAUGCAUUCCACAGUUUAUUAUAUACUUUAAAUGCACCAAGAAUCACGAUUCUUCUGGCUCCCUUCAUCACUGAACAUAA
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Structure
        10          20        30        40        50          
UACUGGUUCAACAUUAU--|   A     GC     U      A      CCAC  UUUAU 
                   GAGU AGAAG  UUGUG UUCUUG UGCAUU    AG     \
                   CUCG UCUUC  AGCAC AAGAAC ACGUAA    UC     U
AAUACAAGUCACUACUUCC^   G     UU     U      C      AUU-  AUAUA 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Obi-Mir-12566-P1_5p*

mirBase accessionNone
Sequence
0- UGUGUUUCUUGAUGCAUUCCACAG -24
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Mature sequence

Obi-Mir-12566-P1_3p

mirBase accessionNone
Sequence
37- UUAAAUGCACCAAGAAUCACGAU -60
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