| MirGeneDB ID | Obi-Mir-12566-P3 |
|---|
| Family name |
MIR-12566 (all species) |
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| Seed |
AAAUGCG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Mir-12566-P1
Obi-Mir-12566-P2
|
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| Orthologues |
Ovu-Mir-12566-P3
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ417213: 421458-421518 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AAAAAAAUCAGAAAUAUUGCAAAUAAAGGAAGCAAUUCUUGGUGCAUUCUACAGUAAUUUUAUAACAUGUAAAUGCGCCAUGAUUUGCACUUCUUUGUUUGCUUCUUGCAUCAAAGACUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAAAAAUCAGAAAUAUU- A-| U U C GUAAUU
GCAAAUAAAGGA GCAA UC UGGUGCAUU UACA U
CGUUUGUUUCUU CGUU AG ACCGCGUAA AUGU U
AGUCAGAAACUACGUUCUU CA^ U U - ACAAUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12566-P3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCAAUUCUUGGUGCAUUCUACA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12566-P3_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAAAUGCGCCAUGAUUUGCACU -61
Get sequence
|
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