| MirGeneDB ID | Pab-Mir-1908 |
|---|---|
| Family name | MIR-1908 (all species) |
| Seed | GGCGGGG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-1908 Hsa-Mir-1908 Mml-Mir-1908 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054688.2: 13276820-13276877 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGCAGUGUGAUUUGGGGCCGGGGAUGCCGCGGCGGGGAAGGCGAUUGGUCCGGAUGUGUGGUACCACCGGCCGCCGGCUCCGCCCCGGCCCCCGCCCCACACGCCGCAUCACUUACAGet precursor sequence |
| Structure | 10 20 30 40 50 CCGCAGUGUGAUUUGGGGC----| AU C AA AU CCGGAUG CGGGG GCCG GGCGGGG GGCG UGGU U GCCCC CGGC CCGCCUC CCGC GCCA G ACAUUCACUACGCCGCACACCCC^ -- C GG CG CCAUGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-1908_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CGGCGGGGAAGGCGAUUGGUC -21
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|
| Star sequence | Pab-Mir-1908_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- CACCGGCCGCCGGCUCCGCCCCG -58
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|
