| MirGeneDB ID | Pab-Mir-3138 |
|---|---|
| Family name | MIR-3138 (all species) |
| Seed | CGGUGAG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-3138 Hsa-Mir-3138 Mml-Mir-3138 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 9053480-9053541 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAGCUGGAGCCUUCCCCUGCCCUCCUCGGCACUUCCCCCACCUCACUGCCUGGGUGCCCACAAGACUGUGGACGGUGAGGUAGAGGGAGUGCCGAGGAGGGGACAGCUGGGCCUCAGAGCCAGet precursor sequence |
| Structure | 10 20 30 40 50 GAGCUGGAGCCUUCCCCUG-- CCC -| UGGGUGCCC CCCUCCUCGGCACUUCC ACCUCACUG CC \ GGGAGGAGCCGUGAGGG UGGAGUGGC GG A ACCGAGACUCCGGGUCGACAG AGA A^ UGUCAGAAC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-3138_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUUCCCCCACCUCACUGCCU -21
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|
| Mature sequence | Pab-Mir-3138_3p (predicted) |
| mirBase accession | None |
| Sequence |
41- ACGGUGAGGUAGAGGGAGUGC -62
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|
