| MirGeneDB ID | Pab-Mir-576 |
|---|
| Family name |
MIR-576 (all species) |
|---|
| Seed |
UUCUAAU |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cja-Mir-576
Hsa-Mir-576
Mml-Mir-576
|
|---|
| Node of Origin (locus) |
Simiiformes
|
|---|
| Node of Origin (family) |
Simiiformes
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 131227342-131227403 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GUAACUGCACCAUUUUACAAUCCAAUGAGGAUUCUAAUUUCUCCAUGUCUUUGGUAAUAAGUUUUGGCAAAGAUGUGGAAAAAUUGGAAUCCUCAUUCGAUUGGUUAUAACCAUCCUAGUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUAACUGCACCAUUUUA--| C C GUAAUA
CAAUC AAUGAGGAUUCUAAUUU UCCAUGUCUUUG A
GUUAG UUACUCCUAAGGUUAAA AGGUGUAGAAAC G
GGUGAUCCUACCAAUAUUG^ C A GGUUUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Pab-Mir-576_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUUCUAAUUUCUCCAUGUCUUUG -23
Get sequence
|
|---|
| Star sequence |
Pab-Mir-576_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- AAGAUGUGGAAAAAUUGGAAUCC -62
Get sequence
|
|---|
