| MirGeneDB ID | Pab-Mir-579 |
|---|---|
| Family name | MIR-579 (all species) |
| Seed | UCAUUUG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-579 Hsa-Mir-579 Mml-Mir-579 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054683.2: 32947756-32947815 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGAAUCAUAUUAGGUUAAUGCAAAAGUAAUCGCGGUUUGUGCCAGAUGACGAUUUGAAUUAGUAAAUUCAUUUGGUAUAAACCGCGAUUAUUUUUGCAUCAACUUAAUACAGUCUAUGGGet precursor sequence |
| Structure | 10 20 30 40 50 UGGAAUCAUAUUAGGUUA--| CGAUUUGA AUGCAAAAGUAAUCGCGGUUUGUGCCAGAUGA A UACGUUUUUAUUAGCGCCAAAUAUGGUUUACU U GGUAUCUGACAUAAUUCAAC^ UAAAUGAU . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-579_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UCGCGGUUUGUGCCAGAUGACGA -23
Get sequence
|
| Mature sequence | Pab-Mir-579_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UUCAUUUGGUAUAAACCGCGAUU -60
Get sequence
|
