| MirGeneDB ID | Pab-Mir-944 |
|---|---|
| Family name | MIR-944 (all species) |
| Seed | AAUUAUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-944 Hsa-Mir-944 Mml-Mir-944 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068843.1: 199823765-199823824 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UAAAUUUGUAUUUAUGUUCCAGACACAUCUCAUCUGAUCUACAAUAUUUUCUUAAAUUGUAUAAAGAGAAAUUAUUGUACAUCAGAUGAGCUGUGUCUGGGAUUAAGUAUUAGCUCCACUGet precursor sequence |
| Structure | 10 20 30 40 50 UAAAUUUGUAUUUAUGU--| U C U UAAAUU UCCAGACACA CUCAUCUGAU UACAAUA UUUCU G GGGUCUGUGU GAGUAGACUA AUGUUAU AAAGA U UCACCUCGAUUAUGAAUUA^ C C U GAAAUA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-944_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAUCUGAUCUACAAUAUUUUCU -22
Get sequence
|
| Mature sequence | Pab-Mir-944_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- AAAUUAUUGUACAUCAGAUGAG -60
Get sequence
|
