| MirGeneDB ID | Pab-Mir-944 |
|---|
| Family name |
MIR-944 (all species) |
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| Seed |
AAUUAUU |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cja-Mir-944
Hsa-Mir-944
Mml-Mir-944
|
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| Node of Origin (locus) |
Simiiformes
|
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| Node of Origin (family) |
Simiiformes
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068843.1: 199823765-199823824 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UAAAUUUGUAUUUAUGUUCCAGACACAUCUCAUCUGAUCUACAAUAUUUUCUUAAAUUGUAUAAAGAGAAAUUAUUGUACAUCAGAUGAGCUGUGUCUGGGAUUAAGUAUUAGCUCCACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAAAUUUGUAUUUAUGU--| U C U UAAAUU
UCCAGACACA CUCAUCUGAU UACAAUA UUUCU G
GGGUCUGUGU GAGUAGACUA AUGUUAU AAAGA U
UCACCUCGAUUAUGAAUUA^ C C U GAAAUA
. 110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-944_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CAUCUGAUCUACAAUAUUUUCU -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-944_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- AAAUUAUUGUACAUCAGAUGAG -60
Get sequence
|
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