MirGeneDB 3.0

MirGeneDB ID

Pcr-Mir-124-o5

Family name MIR-124 (all species)
Seed AAGGCAC
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues Pcr-Mir-124-o4 
Orthologues Aae-Mir-124  Aga-Mir-124  Agr-Mir-124  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bko-Mir-124  Bla-Mir-124  Bpl-Mir-124  Cel-Mir-124  Cte-Mir-124  Dan-Mir-124  Dlo-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dsi-Mir-124  Dya-Mir-124  Eba-Mir-124  Ebu-Mir-124-P5-v1  Ebu-Mir-124-P5-v2  Esc-Mir-124  Gpa-Mir-124  Gsp-Mir-124  Hme-Mir-124  Hru-Mir-124  Isc-Mir-124  Lan-Mir-124  Lhy-Mir-124  Llo-Mir-124  Mom-Mir-124  Npo-Mir-124  Obi-Mir-124  Ofu-Mir-124  Ovu-Mir-124  Pau-Mir-124  Pdu-Mir-124  Pfl-Mir-124  Pmi-Mir-124  Pve-Mir-124  Sko-Mir-124  Sma-Mir-124  Sne-Mir-124  Snu-Mir-124  Spu-Mir-124  Sro-Mir-124  Tca-Mir-124  War-Mir-124  Xbo-Mir-124 
Node of Origin (locus) P. crozeri
Node of Origin (family) Bilateria
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)
CAJQUW010012883.1: 1244644-1244702 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCGAUGAUAAACUCGACCAACCAGUCUGGCAUUCUCUGUUUGACCUUGAUGAGCCCUGAUUACUAUUAAGGCACGCGGUGAAUGCCAACGUGGUUCGAGAGAGCAACUCAAACUUCC
Get precursor sequence
Structure
        10        20           30        40        50         
CUGCGAUGAUAAACUCGACC--     -| C        U    U  A       GAGCCC 
                      AACCA GU UGGCAUUC CUGU UG CCUUGAU      U
                      UUGGU CA ACCGUAAG GGCG AC GGAAUUA      G
CCUUCAAACUCAACGAGAGAGC     G^ -        U    C  -       UCAUUA 
       110       100        90         80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pcr-Mir-124-o5_5p* (predicted)

mirBase accessionNone
Sequence
0- GCAUUCUCUGUUUGACCUUGAU -22
Get sequence
Mature sequence

Pcr-Mir-124-o5_3p

mirBase accessionNone
Sequence
38- UAAGGCACGCGGUGAAUGCCA -59
Get sequence