| MirGeneDB ID | Pma-Mir-208-P3b |
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| Family name |
MIR-208 (all species) |
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| Seed |
UGCUCCU |
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| Species |
Sea Lamprey (Petromyzon marinus) |
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| MiRBase ID |
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| Paralogues |
Pma-Mir-208-P3a1-v1
Pma-Mir-208-P3a1-v2
Pma-Mir-208-P3a2-v1
Pma-Mir-208-P3a2-v2
Pma-Mir-208-P3a3-v1
Pma-Mir-208-P3a3-v2
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| Orthologues |
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| Node of Origin (locus) |
P. marinus
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCF_010993605.1_kPetMar1.pri_genomic) |
NC_046093.1: 2192594-2192652 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGAUUGGGGGGUUCCAGGUGGCGGACGGCCGUGCUCCUCGCUCGUUUUAUGUCUCGCACUCAGGAAGAUAAGACGAGCAAGUAGUCGGUCCGUCCGUCACGCAACGCGCGCCACCUGUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGAUUGGGGGGUUCCAG-- -| U C C GUCUCGCA
GUGGCGGACGG CCG GCU CU GCUCGUUUUAU \
CACUGCCUGCC GGC UGA GA CGAGCAGAAUA C
GUGUCCACCGCGCGCAACG U^ - U A GAAGGACU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Br |
Gi |
Gu |
He |
Ki |
La |
Li |
Mo |
Mu |
Sk |
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| Mature sequence |
Pma-Mir-208-P3b_5p |
| mirBase accession | None |
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| Sequence |
0- GUGCUCCUCGCUCGUUUUAUGU -22
Get sequence
|
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| Co-mature sequence |
Pma-Mir-208-P3b_3p |
| mirBase accession | None |
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| Sequence |
37- AUAAGACGAGCAAGUAGUCGGU -59
Get sequence
|
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