MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-3593

Family name MIR-3593 (all species)
Seed UUCAACC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-3593
Paralogues
Orthologues
Node of Origin (locus) R. norvegicus
Node of Origin (family) R. norvegicus
Genome context
(rn6)		 chr6: 76661814-76661867 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAAACUCCAUCACCACACGACUGGAUUUUGGCCUCCGCAGGGUUGAAGCUGCUAGAGAAGCUUCAACCUUAAGGGGGCCUCAGGGAGAGAGGAGUGGCGCCGCGGCGGAGCG
Get precursor sequence
Structure
        10        20               30        40        50      
GUGAAACUCCAUCACCACACGA-------|   AUUUU       GC            GCU 
                             CUGG     GGCCUCC  AGGGUUGAAGCU   A
                             GACU     CCGGGGG  UUCCAACUUCGA   G
GCGAGGCGGCGCCGCGGUGAGGAGAGAGG^   -----       AA            AGA 
  110       100        90             80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-3593_5p*
mirBase accessionMIMAT0017896
Sequence 
0- UGGCCUCCGCAGGGUUGAAGCU -22
Get sequence
Proposed targets TargetScanVert: rno-miR-3593-5p
miRDB: MIMAT0017896
Mature sequence

Rno-Mir-3593_3p
mirBase accessionMIMAT0017897
Sequence 
32- CUUCAACCUUAAGGGGGCCUCA -54
Get sequence
Proposed targets TargetScanVert: rno-miR-3593-3p
miRDB: MIMAT0017897