| MirGeneDB ID | Sha-Mir-12468 |
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| Family name |
MIR-12468 (all species) |
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| Seed |
AGUAAUG |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-12468
Neu-Mir-12468
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL834452.1: 2380660-2380715 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACGAUGGAACAAUAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUGUAGUAAAUGGAAAUCAGUUUCAUUACUUAACAGUCACAUUUAAUCUUCUGCAACGCUGUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACGAUGGAACAAUAUCA--| AUA GGUG
AGGUGUGACU AAGUAAUGAGAUUGAUUUCUGU U
UUUACACUGA UUCAUUACUUUGACUAAAGGUA A
UUGUCGCAACGUCUUCUAA^ CAA AAUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-12468_5p |
| mirBase accession | None |
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| Sequence |
0- AAGUAAUGAGAUUGAUUUCUGU -22
Get sequence
|
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| Star sequence |
Sha-Mir-12468_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
34- GGAAAUCAGUUUCAUUACUUAA -56
Get sequence
|
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