| MirGeneDB ID | Sha-Mir-7254-v2 |
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| Family name |
MIR-7254 (all species) |
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| Seed |
UCACCAC |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
|
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| Paralogues |
Sha-Mir-7254-v1
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| Orthologues |
Mdo-Mir-7254-v2
Neu-Mir-7254-v2
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL834628.1: 2737209-2737271 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUGCCUGAUGCGCGAUGAUGUCAUUCCCAUAUCACCACCUCCUUGAAUCCUGUUCUAAUGUGAGUGAUGCAGAGUUCAGGGUGGAUGUGGCCUGGGAUUGAACAGGUGAGCUUCUAUGGCCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUGCCUGAUGCGCGAUGA- -| U UA CA U UC UCUAAUG
UG UCA UCCCA UCAC CC CCUUGAA CUGU \
AC AGU AGGGU GGUG GG GGGACUU GACG U
GACCGGUAUCUUCGAGUGG A^ U CC UA U GA UAGUGAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7254-v2_5p |
| mirBase accession | None |
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| Sequence |
0- AUCACCACCUCCUUGAAUCCUGU -23
Get sequence
|
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| Star sequence |
Sha-Mir-7254-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- AGAGUUCAGGGUGGAUGUGGCCU -63
Get sequence
|
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