| MirGeneDB ID | Sha-Mir-7254-v1 |
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| Family name |
MIR-7254 (all species) |
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| Seed |
CACCACC |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
Sha-Mir-7254-v2
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| Orthologues |
Mdo-Mir-7254-v1
Neu-Mir-7254-v1
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(DEVIL_add) |
GL834628.1: 2737210-2737270 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCCUGAUGCGCGAUGAUGUCAUUCCCAUAUCACCACCUCCUUGAAUCCUGUUCUAAUGUGAGUGAUGCAGAGUUCAGGGUGGAUGUGGCCUGGGAUUGAACAGGUGAGCUUCUAUGGCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCCUGAUGCGCGAUGA- -| U UA CA U UC UCUAAUG
UG UCA UCCCA UCAC CC CCUUGAA CUGU \
AC AGU AGGGU GGUG GG GGGACUU GACG U
ACCGGUAUCUUCGAGUGG A^ U CC UA U GA UAGUGAG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7254-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCACCACCUCCUUGAAUCCUGU -22
Get sequence
|
|---|
| Star sequence |
Sha-Mir-7254-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- AGAGUUCAGGGUGGAUGUGGCC -61
Get sequence
|
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