MirGeneDB 3.0

MirGeneDB ID

Sha-Mir-7262-P6

Family name MIR-7262 (all species)
Seed AAAACCG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7262-P1  Sha-Mir-7262-P2  Sha-Mir-7262-P3  Sha-Mir-7262-P4  Sha-Mir-7262-P5  Sha-Mir-7262-P7 
Orthologues Mdo-Mir-7262-P6 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL861558.1: 240943-240997 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGGCAAAGUCUUAUAUACAGGAUGUCCCAAAAGUCUUAAUGCAGGUUUAAGGUUUUAAAGUUUAAAACCGCACUAAGACUUUUGGAAUACCUUGUAUUUGAAAUGUUAAUAUAA
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Structure
        10          20        30        40        50       
AGGGCAAAGUCUUAUAU--|    A   C            A   A     A   UUU 
                   ACAGG UGU CCAAAAGUCUUA UGC GGUUU AGG   U
                   UGUUC AUA GGUUUUCAGAAU ACG CCAAA UUU   A
AAUAUAAUUGUAAAGUUUA^    C   A            C   -     A   GAA 
   110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7262-P6_5p* (predicted)

mirBase accessionNone
Sequence
0- AAAGUCUUAAUGCAGGUUUAAGG -23
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Mature sequence

Sha-Mir-7262-P6_3p (predicted)

mirBase accessionNone
Sequence
33- UAAAACCGCACUAAGACUUUUG -55
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