MirGeneDB 3.0

MirGeneDB ID

Sko-Mir-4831

Family name MIR-4831 (all species)
Seed UCGGCAA
Species Saccoglossus (Saccoglossus kowalevskii)
MiRBase ID sko-mir-4831
Paralogues
Orthologues Pfl-Mir-4831 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Skow_1.1)
NW_003120434.1: 28404-28464 [-]
Precursor
(pre-Mir +30nt flank)
UUUGGAAAGCCUUUGCGUGUUCUAGUGUCAGCAGAGUACAUCUUGCUGUAAAUGAGAAGUUAAUGUAUUUCGGCAAAUUGUACUCUCGCUAACAACUGGNNNNNNNNNNNNNNNNNNNNNN
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Structure
        10        20          30         40        50          
UUUGGAAAGCCUUUGCGUGUU-    -   C   -|       UC      U    GAGAAG 
                      CUAG UGU AGC AGAGUACA  UUGCUG AAAU      \
                      GGUC ACA UCG UCUCAUGU  AACGGC UUUA      U
NNNNNNNNNNNNNNNNNNNNNN    A   A   C^       UA      -    UGUAAU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Sko-Mir-4831_5p* (predicted)

mirBase accessionNone
Sequence
0- GCAGAGUACAUCUUGCUGUAAAU -23
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Mature sequence

Sko-Mir-4831_3p

mirBase accessionMIMAT0020045
Sequence
38- UUCGGCAAAUUGUACUCUCGCUA -61
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