MirGeneDB ID | Pfl-Mir-4831 |
Family name |
MIR-4831 (all species) |
Seed |
UCGGCAA |
Species |
Ptychodera (Ptychodera flava) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Sko-Mir-4831
|
Node of Origin (locus) |
Enteropneusta
|
Node of Origin (family) |
Enteropneusta
|
Genome context (Pfl) |
LD352251.1: 81024-81083 [+]
|
Precursor (pre-Mir +30nt flank) |
UCCUUGAGCUUGGCGUUGUUCCAGGUGUUGGCAGGGUAUGUUUUGCUGUAAAUGAGAGUUACACUAUUUCGGCAAAAUGUACUCUUGCAAACAACUGGGAUCUCGAGCAUCAAUCCAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50
UCCUUGAGCUUGGCGUU-- G G -| U GAGAG
GUUCCAG UGUU GCAGG GUAUGUUUUGCUG AAAU U
UAGGGUC ACAA CGUUC CAUGUAAAACGGC UUUA U
CUAACCUAACUACGAGCUC A A U^ - UCACA
. 110 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Pfl-Mir-4831_5p* |
mirBase accession | None |
Sequence |
0- GCAGGGUAUGUUUUGCUGUAAAU -23
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|
Mature sequence |
Pfl-Mir-4831_3p |
mirBase accession | None |
Sequence |
37- UUCGGCAAAAUGUACUCUUGCAA -60
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|