MirGeneDB 3.0

MirGeneDB ID

Pfl-Mir-4831

Family name MIR-4831 (all species)
Seed UCGGCAA
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues
Orthologues Sko-Mir-4831 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Pfl)
LD352251.1: 81024-81083 [+]
Precursor
(pre-Mir +30nt flank)
UCCUUGAGCUUGGCGUUGUUCCAGGUGUUGGCAGGGUAUGUUUUGCUGUAAAUGAGAGUUACACUAUUUCGGCAAAAUGUACUCUUGCAAACAACUGGGAUCUCGAGCAUCAAUCCAAUC
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Structure
        10          20        30         40        50         
UCCUUGAGCUUGGCGUU--       G    G     -|            U    GAGAG 
                   GUUCCAG UGUU GCAGG GUAUGUUUUGCUG AAAU     U
                   UAGGGUC ACAA CGUUC CAUGUAAAACGGC UUUA     U
CUAACCUAACUACGAGCUC       A    A     U^            -    UCACA 
.       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pfl-Mir-4831_5p*

mirBase accessionNone
Sequence
0- GCAGGGUAUGUUUUGCUGUAAAU -23
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Mature sequence

Pfl-Mir-4831_3p

mirBase accessionNone
Sequence
37- UUCGGCAAAAUGUACUCUUGCAA -60
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