MirGeneDB 3.0
86 Ptychodera flava microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Pfl-Let-7 None LET-7 GAGGUAG None None LD349317.1 35634 35701 - Bilateria Bilateria Unknown 1
Pfl-Mir-1 None MIR-1 GGAAUGU None None LD345073.1 123485 123547 + Bilateria Bilateria No
Pfl-Mir-7 None MIR-7 GGAAGAC None None LD347705.1 18505 18566 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-8 None MIR-8 AAUACUG None None LD342655.1 279389 279449 - Bilateria Nephrozoa No 1
Pfl-Mir-9-v1 None MIR-9 CUUUGGU None None LD344854.1 129993 130052 + Bilateria Bilateria No 1 1
Pfl-Mir-9-v2 None MIR-9 CUUUGGU None None LD344854.1 129993 130052 + Bilateria Bilateria No 1
Pfl-Mir-10-P1 None MIR-10 ACCCUGU None None LD344867.1 476557 476616 + Bilateria Eumetazoa Unknown 1
Pfl-Mir-10-P2 None MIR-10 ACCCGUA None None LD349317.1 44526 44584 - Bilateria Eumetazoa No 1
Pfl-Mir-10-P3j1 None MIR-10 CCCUGAG None None LD348914.1 17512 17570 + P. flava Eumetazoa No 1 1
Pfl-Mir-10-P3j2 None MIR-10 CCCUGAG None None LD348914.1 17512 17570 + P. flava Eumetazoa No 1 1
Pfl-Mir-10-P3k None MIR-10 CAGGUUA None None LD350399.1 124091 124151 + P. flava Eumetazoa No 1 1
Pfl-Mir-22-P1 None MIR-22 AGCUGCC None None LD346721.1 581033 581090 - Bilateria Bilateria Unknown 1
Pfl-Mir-22-P2 None MIR-22 CAGCUGC None None LD346721.1 582412 582474 - Bilateria Bilateria No
Pfl-Mir-29-P1 None MIR-29 AGCACCA None None LD346879.1 78304 78364 + Bilateria Bilateria No 1
Pfl-Mir-29-P2 None MIR-29 AGCACCA None None LD346879.1 81562 81623 + Bilateria Bilateria No 1 1
Pfl-Mir-31 None MIR-31 GGCAAGA None None LD342794.1 648341 648399 - Bilateria Bilateria Unknown 1
Pfl-Mir-33 None MIR-33 UGCAUUG None None LD343728.1 540210 540271 - Bilateria Bilateria Unknown 1
Pfl-Mir-34 None MIR-34 GGCAGUG None None LD524815.1 31840 31898 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-71 None MIR-71 GAAAGAC None None LD353158.1 300398 300457 - Bilateria Nephrozoa Unknown 1
Pfl-Mir-92-o41 None MIR-92 AUUGCAC None None LD343282.1 96920 96979 + P. flava Bilateria No 1
Pfl-Mir-92-o42 None MIR-92 AUUGCAC None None LD343282.1 114848 114906 + P. flava Bilateria No 1 1
Pfl-Mir-92-o43 None MIR-92 AUUGCAC None None LD343282.1 115115 115177 + P. flava Bilateria No
Pfl-Mir-92-o44 None MIR-92 AUUGCAC None None LD343282.1 115395 115459 + P. flava Bilateria No 1 1
Pfl-Mir-92-o45 None MIR-92 AUUGCAC None None LD343282.1 115958 116021 + P. flava Bilateria No 1 1
Pfl-Mir-96-P1 None MIR-96 UUGGCAC None None LD345584.1 198910 198968 - Bilateria Bilateria Unknown 1
Pfl-Mir-96-P2 None MIR-96 UUGGCAA None None LD345584.1 198298 198362 - Bilateria Bilateria Unknown 1 1 1
Pfl-Mir-96-P3 None MIR-96 AUGGCAC None None LD345584.1 199276 199339 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-103 None MIR-103 GCAGCAU None None LD346721.1 581831 581890 - Bilateria Bilateria Yes
Pfl-Mir-124 None MIR-124 AAGGCAC None None LD355232.1 155525 155587 - Bilateria Bilateria No 1
Pfl-Mir-133-v1 None MIR-133 UUGGUCC None None LD345073.1 192531 192590 + Bilateria Bilateria No 1
Pfl-Mir-133-v2 None MIR-133 UGGUCCC None None LD345073.1 192531 192590 + Bilateria Bilateria No 1
Pfl-Mir-137-v1 None MIR-137 AUUGCUU None None LD343696.1 352495 352552 - Bilateria Bilateria No 1
Pfl-Mir-137-v2 None MIR-137 UAUUGCU None None LD343696.1 352495 352552 - Bilateria Bilateria No 1
Pfl-Mir-153 None MIR-153 UGCAUAG None None LD348957.1 284194 284252 + Bilateria Bilateria No 1 1
Pfl-Mir-184 None MIR-184 GGACGGA None None LD343748.1 220101 220160 + Bilateria Nephrozoa No 1
Pfl-Mir-190 None MIR-190 GAUAUGU None None LD356152.1 43344 43402 - Bilateria Bilateria Unknown 1
Pfl-Mir-193-P1c None MIR-193 ACUGGCC None None LD349275.1 115030 115089 + Enteropneusta Bilateria No 1 1 1
Pfl-Mir-193-P1d None MIR-193 ACUGGCC None None LD349275.1 115517 115576 + Enteropneusta Bilateria No 1 1
Pfl-Mir-193-P2 None MIR-193 AAUGCCC None None LD349275.1 117222 117282 + Bilateria Bilateria No 1
Pfl-Mir-210-P25a None MIR-210 UGUGCGU None None LD347622.1 60060 60120 - P. flava Bilateria No 1
Pfl-Mir-210-P25b None MIR-210 UGUGCGU None None LD347622.1 60060 60120 - P. flava Bilateria No 1
Pfl-Mir-219 None MIR-219 GAUUGUC None None LD345001.1 105047 105112 - Bilateria Bilateria Unknown 1 1
Pfl-Mir-242 None MIR-242 GCGUAGG None None LD346879.1 366091 366150 + Bilateria Nephrozoa Unknown 1
Pfl-Mir-252-P1 None MIR-252 UAAGUAG None None LD368470.1 39994 40053 + Bilateria Bilateria Unknown 1
Pfl-Mir-252-P2 None MIR-252 UAAGUAC None None LD368470.1 41174 41234 + unknown Bilateria No 1 1
Pfl-Mir-278 None MIR-278 CGGUGGG None None LD346721.1 447470 447531 - Bilateria Bilateria No 1 1 1
Pfl-Mir-281 None MIR-281 GUCAUGG None None LD346606.1 193921 193982 - Bilateria Nephrozoa No 1
Pfl-Mir-315 None MIR-315 UUUGAUU None None LD349104.1 101009 101069 - Bilateria Nephrozoa Unknown
Pfl-Mir-375 None MIR-375 UUGUUCG None None LD344517.1 177550 177613 - Bilateria Nephrozoa No 1 1 1
Pfl-Mir-2001 None MIR-2001 UGUGACC None None LD368470.1 38645 38714 + Bilateria Bilateria No 1 1
Pfl-Mir-2006 None MIR-2006 AGCACAC None None LD527063.1 34000 34058 - Ambulacraria Ambulacraria No 1
Pfl-Mir-2007 None MIR-2007 AUUUCAG None None LD354612.1 123309 123374 + Ambulacraria Ambulacraria No 1 1
Pfl-Mir-2008 None MIR-2008 CAGCCUC None None LD526296.1 136777 136837 - Ambulacraria Ambulacraria Unknown 1
Pfl-Mir-2009 None MIR-2009 GAGUUGU None None LD355980.1 422987 423047 + Ambulacraria Ambulacraria No 1 1
Pfl-Mir-2011 None MIR-2011 CAAGGUG None None LD346233.1 326914 326976 + Ambulacraria Ambulacraria No 1 1
Pfl-Mir-2012 None MIR-2012 AGUACUG None None LD344014.1 121392 121453 + Ambulacraria Ambulacraria Unknown
Pfl-Mir-4818-P1 None MIR-4818 UUGCACU None None LD345931.1 65685 65745 - Enteropneusta Enteropneusta No 1 1 1
Pfl-Mir-4818-P2 None MIR-4818 AUUGCAC None None LD345931.1 65538 65597 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4818-P3 None MIR-4818 AUUGCAC None None LD345931.1 65230 65289 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4818-P4 None MIR-4818 AUUGCAC None None LD345931.1 65041 65101 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4818-P5 None MIR-4818 AUUGCAC None None LD345931.1 60244 60301 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4818-P6 None MIR-4818 AUUGCAC None None LD345931.1 60006 60068 - Enteropneusta Enteropneusta No 1 1 1
Pfl-Mir-4819 None MIR-4819 CUUGGAC None None LD344947.1 75194 75252 + Enteropneusta Enteropneusta No
Pfl-Mir-4820 None MIR-4820 GAGCUUC None None LD343718.1 81400 81463 + Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4824 None MIR-4824 AACUUAC None None LD357736.1 49417 49479 - Enteropneusta Enteropneusta Unknown 1
Pfl-Mir-4825-P1a None MIR-4825 CACACCU None None LD342864.1 121309 121370 + P. flava Enteropneusta Yes 1
Pfl-Mir-4825-P1b None MIR-4825 CACACCU None None LD342864.1 121309 121370 + P. flava Enteropneusta Yes 1
Pfl-Mir-4826 None MIR-4826 AUCCGAU None None LD343550.1 44743 44809 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4828-P1 None MIR-4828 GUAAAUA None None LD343010.1 765739 765802 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4828-P2 None MIR-4828 GUAAAUG None None LD343010.1 765581 765644 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4828-P3 None MIR-4828 GUAAAUG None None LD343010.1 765387 765446 - Enteropneusta Enteropneusta No 1 1 1
Pfl-Mir-4828-P4 None MIR-4828 GUAAAUA None None LD343010.1 765234 765296 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4829-P1 None MIR-4829 GUACUCU None None LD533351.1 109641 109700 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4829-P2 None MIR-4829 GUACUCU None None LD533351.1 109846 109914 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4829-P3 None MIR-4829 GUACUUU None None LD533351.1 110032 110091 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4830-P5 None MIR-4830 CUCUUGA None None LD353158.1 295072 295133 - P. flava Enteropneusta Unknown 1
Pfl-Mir-4830-P6 None MIR-4830 CUCUUGA None None LD353158.1 294064 294125 - P. flava Enteropneusta No
Pfl-Mir-4830-P7 None MIR-4830 CUCUUGA None None LD353158.1 289927 289988 - P. flava Enteropneusta Unknown 1 1
Pfl-Mir-4830-P8 None MIR-4830 CUCUUGA None None LD353158.1 289427 289486 - P. flava Enteropneusta No 1
Pfl-Mir-4831 None MIR-4831 UCGGCAA None None LD352251.1 81024 81083 + Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4835 None MIR-4835 CAAGCAG None None LD349453.1 152990 153050 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4838 None MIR-4838 GCUCCUG None None LD527542.1 213535 213594 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4839 None MIR-4839 AAGUUUU None None LD346064.1 153036 153094 - Enteropneusta Enteropneusta Unknown
Pfl-Novel-1 None PFL-NOVEL-1 UUCAUCU None None LD348073.1 223086 223149 - P. flava P. flava No
Pfl-Novel-2 None PFL-NOVEL-2 AUUGUGU None None LD353693.1 57013 57071 + P. flava P. flava No 1
Pfl-Novel-3 None PFL-NOVEL-3 CGUGUAA None None LD361500.1 8168 8234 - P. flava P. flava No 1 1

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