MirGeneDB 3.0
MirGeneDB ID

Pfl-Mir-4829-P2

Family name MIR-4829 (all species)
Seed GUACUCU
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-4829-P1  Pfl-Mir-4829-P3 
Orthologues Sko-Mir-4829-P2 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Pfl)		 LD533351.1: 109846-109914 [+]
Precursor
(pre-Mir +30nt flank)
CAGUUGGGAUCUAAUGUCGGGAAUAUUGGCCAGGCGUUUGUGUUGAGCACAUUGUGGUUGAUACAAAUACUUCUAAAUGUACUCUUCCCAACGCCUGGCUAAAAUUCCUCAACAACACAUCAGAGUGGU
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Structure
        10          20        30        40        50        60    
CAGUUGGGAUCUAAUGUC--|     A             UGUGUU   C     GUGGUUGAUA 
                    GGGAAU UUGGCCAGGCGUU      GAG ACAUU          C
                    UCCUUA AAUCGGUCCGCAA      CUC UGUAA          A
UGGUGAGACUACACAACAAC^     A             CCCUU-   A     AUCUUCAUAA 
       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Star sequence

Pfl-Mir-4829-P2_5p*
mirBase accessionNone
Sequence 
0- CAGGCGUUUGUGUUGAGCACAUU -23
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Mature sequence

Pfl-Mir-4829-P2_3p
mirBase accessionNone
Sequence 
47- UGUACUCUUCCCAACGCCUGGC -69
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