MirGeneDB 3.0
MirGeneDB ID

Pfl-Mir-9-v2

Family name MIR-9 (all species)
Seed CUUUGGU
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-9-v1 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sko-Mir-9-v2  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Pfl)		 LD344854.1: 129993-130052 [+]
Precursor
(pre-Mir +30nt flank)
GGUGCACCGACAAGUCUGGCGCUCGUUUUCUCUUUGGUUAUCUAGCUGUAUGAGUGUUCUAGACAUUAUAAAGCUAGGUUACCAAAGACAAAAACAGAUGCCGUAAUUCAACUGAACACU
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Structure
        10         20         30         40        50         
GGUGCACCGACAAGUCU-    -| C     C-        U        G    AGUGUU 
                  GGCG CU GUUUU  UCUUUGGU AUCUAGCU UAUG      C
                  CCGU GA CAAAA  AGAAACCA UGGAUCGA AUAU      U
UCACAAGUCAACUUAAUG    A^ -     AC        U        A    UACAGA 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Pfl-Mir-9-v2_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUG -22
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Co-mature sequence

Pfl-Mir-9-v2_3p
mirBase accessionNone
Sequence 
38- UAAAGCUAGGUUACCAAAGACA -60
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