MirGeneDB ID | Pfl-Mir-4830-P5 |
Family name |
MIR-4830 (all species) |
Seed |
CUCUUGA |
Species |
Ptychodera (Ptychodera flava) |
MiRBase ID |
|
Paralogues |
Pfl-Mir-4830-P6
Pfl-Mir-4830-P7
Pfl-Mir-4830-P8
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Orthologues |
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Node of Origin (locus) |
P. flava
|
Node of Origin (family) |
Enteropneusta
|
Genome context (Pfl) |
LD353158.1: 295072-295133 [-]
|
Precursor (pre-Mir +30nt flank) |
GGCCAAGAUUAGAAAUUGAGUGUUAUGGUGUCUCUUGAGAGCCAUAUGGAGGAGUUAACGGUGAUAGUUCCUCCGUAGGCUUUCAGGAAAUACCAUUUCGCUUCAUGAUUGUCCGGUUGUGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GGCCAAGAUUAGAAAUU--| UU C A AGUUAACG
GAGUG AUGGUGU UCUUGAGAGCC UAUGGAGG \
UUCGC UACCAUA AGGACUUUCGG AUGCCUCC G
CGUGUUGGCCUGUUAGUAC^ UU A - UUGAUAGU
120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Pfl-Mir-4830-P5_5p |
mirBase accession | None |
Sequence |
0- UCUCUUGAGAGCCAUAUGGAGG -22
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|
Star sequence |
Pfl-Mir-4830-P5_3p* (predicted) |
mirBase accession | None |
Sequence |
41- UCCGUAGGCUUUCAGGAAAUA -62
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