MirGeneDB 3.0
MirGeneDB ID

Pfl-Mir-4838

Family name MIR-4838 (all species)
Seed GCUCCUG
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues
Orthologues Sko-Mir-4838 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Pfl)		 LD527542.1: 213535-213594 [+]
Precursor
(pre-Mir +30nt flank)
UGGUAUCAGUAAGAAUUGAUUGGUUAAGACAACUGGUAACAGUAGGAACGCCAGAUAGUUGUGUUUUCUGCUCCUGCUGCUAUCAGUAGUCUUGGCCGAUGUCUUCCCUUAUCACGCUGU
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Structure
        10          20        30        40        50        60
UGGUAUCAGUAAGAAUUG--|           A       A        AC  CAGAUAGU 
                    AUUGGUUAAGAC ACUGGUA CAGUAGGA  GC        U
                    UAGCCGGUUCUG UGACUAU GUCGUCCU  CG        G
UGUCGCACUAUUCCCUUCUG^           A       C        --  UCUUUUGU 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Pfl-Mir-4838_5p*
mirBase accessionNone
Sequence 
0- AACUGGUAACAGUAGGAACGCC -22
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Mature sequence

Pfl-Mir-4838_3p
mirBase accessionNone
Sequence 
38- UGCUCCUGCUGCUAUCAGUAGU -60
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