MirGeneDB 3.0
MirGeneDB ID

Pfl-Mir-4828-P2

Family name MIR-4828 (all species)
Seed GUAAAUG
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-4828-P1  Pfl-Mir-4828-P3  Pfl-Mir-4828-P4 
Orthologues Sko-Mir-4828-P2 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Pfl)		 LD343010.1: 765581-765644 [-]
Precursor
(pre-Mir +30nt flank)
AGGUCUUGCAAGAUUUUGUGACCAAUGAUCCAGUCUCAGUGUGCAUUUUCAUCUGUUUGCAUUGUGAUGGACAGUAAAUGCCACUGAGAUUAGAGUGUUGGUCAGAAUAUCAUCGAGGUCCACA
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Structure
        10          20        30        40        50        60  
AGGUCUUGCAAGAUUUUG--|       GA  C          U      UCAUCUGUUUGCA 
                    UGACCAAU  UC AGUCUCAGUG GCAUUU             \
                    ACUGGUUG  AG UUAGAGUCAC CGUAAA             U
ACACCUGGAGCUACUAUAAG^       UG  A          -      UGACAGGUAGUGU 
  120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pfl-Mir-4828-P2_5p*
mirBase accessionNone
Sequence 
0- CAGUCUCAGUGUGCAUUUUCAU -22
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Mature sequence

Pfl-Mir-4828-P2_3p
mirBase accessionNone
Sequence 
42- AGUAAAUGCCACUGAGAUUAGA -64
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