MirGeneDB 3.0
MirGeneDB ID

Pfl-Mir-4818-P4

Family name MIR-4818 (all species)
Seed AUUGCAC
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-4818-P1  Pfl-Mir-4818-P2  Pfl-Mir-4818-P3  Pfl-Mir-4818-P5  Pfl-Mir-4818-P6 
Orthologues Sko-Mir-4818-P4 
Node of Origin (locus) Enteropneusta
Node of Origin (family) Enteropneusta
Genome context
(Pfl)		 LD345931.1: 65041-65101 [-]
Precursor
(pre-Mir +30nt flank)
AGAAUAGACUUCACACUGGUGUGUAUUGUUCUCUAUUAUUCAGUGCAAAAUGGAGUGAAUUGUCUAUUCCAUUGCACUGAAUAGUGGGGCACAGUGGACACUACAGUGAAUCAUGUAUUUC
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Structure
        10          20        30        40        50        60 
AGAAUAGACUUCACACU--|    G      U                 AA     GUGAAU 
                   GGUGU UAUUGU CUCUAUUAUUCAGUGCA  AUGGA      \
                   UCACA GUGACA GGGGUGAUAAGUCACGU  UACCU      U
CUUUAUGUACUAAGUGACA^    G      C                 --     UAUCUG 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
To
Star sequence

Pfl-Mir-4818-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUCUAUUAUUCAGUGCAAAAUGGA -24
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Mature sequence

Pfl-Mir-4818-P4_3p
mirBase accessionNone
Sequence 
39- CAUUGCACUGAAUAGUGGGGCA -61
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