| MirGeneDB ID | Pfl-Mir-4835 |
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| Family name |
MIR-4835 (all species) |
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| Seed |
CAAGCAG |
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| Species |
Ptychodera (Ptychodera flava) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Sko-Mir-4835
|
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| Node of Origin (locus) |
Enteropneusta
|
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| Node of Origin (family) |
Enteropneusta
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Genome context
(Pfl) |
LD349453.1: 152990-153050 [-]
|
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Precursor
(pre-Mir +30nt flank) |
UACUGUAUUGGUGCAGAGCUGUUGACUUUAGGGUGGCUGGACCGCUUAAUGUGUUCAUGUUAAUGCUCAUCAAGCAGUCCAUCCAUCCUUGAAGUUGACAGUCUAAUACGCUGACUGACUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UACUGUAUUGGUGCAGA-- UG -| C C A UGUUCAU
GCUGU ACUUU AGGGUGG UGGAC GCUU AUG G
UGACA UGAAG UCCUACC ACCUG CGAA UAC U
GUCAGUCAGUCGCAUAAUC GU U^ U A C UCGUAAU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Pfl-Mir-4835_5p* |
| mirBase accession | None |
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| Sequence |
0- GGGUGGCUGGACCGCUUAAUG -21
Get sequence
|
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| Mature sequence |
Pfl-Mir-4835_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UCAAGCAGUCCAUCCAUCCUUG -61
Get sequence
|
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