| MirGeneDB ID | Sro-Mir-12495 |
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| Family name |
MIR-12495 (all species) |
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| Seed |
UAGCUUG |
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| Species |
Roscoff worm (Symsagittifera roscoffensis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Hmi-Mir-12495
Xbo-Mir-12495
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| Node of Origin (locus) |
Xenacoelomorpha
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| Node of Origin (family) |
Xenacoelomorpha
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Genome context
(GCA_025153585.1_SymRos_1_5_genomic) |
JANVAR010000698.1: 1112135-1112199 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAUUUAUUUCAAUUGGAAUGGUCAAAUUUCGUGCGCCGUAUCAAGUUCAACCAAAACUCAAAUAUGAAUAAGGUUAGCUUGAGCGUCGCACUAUUUACGACAUUCCCGAACAACGUAAGUACAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGAUUUAUUUCAAUUGGAAUG--| AAAUUUC C A C AAAACUCAA
GUC GUGCG CGU UCAAGUU AACC \
CAG CACGC GCG AGUUCGA UUGG A
CACAUGAAUGCAACAAGCCCUUA^ CAUUUAU U - - AAUAAGUAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Sro-Mir-12495_5p* |
| mirBase accession | None |
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| Sequence |
0- CGUGCGCCGUAUCAAGUUCAACC -23
Get sequence
|
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| Mature sequence |
Sro-Mir-12495_3p |
| mirBase accession | None |
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| Sequence |
44- UUAGCUUGAGCGUCGCACUAU -65
Get sequence
|
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