| MirGeneDB ID | Xbo-Mir-12495 |
|---|
| Family name |
MIR-12495 (all species) |
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| Seed |
UUAGCUU |
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| Species |
Xenoturbella (Xenoturbella bocki) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Hmi-Mir-12495
Sro-Mir-12495
|
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| Node of Origin (locus) |
Xenacoelomorpha
|
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| Node of Origin (family) |
Xenacoelomorpha
|
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Genome context
(genome.xe) |
scaffold1990: 75648-75707 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUUGAAUUCAAAAUUUUGUCAGUGUUGACGCGUGUGAUAUUCAGGGCUAGCCUUUAUUCUCAGUCAAGAUUAGCUUGGGUGUCACAUGUGUUACCACUGAUCAAAUCAACGUUAUGAAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUGAAUUCAAAAUUUU--| U G GC UUAUUC
GUCAGUG UGACGCGUGUGAUAUUCAGG CUA CU \
UAGUCAC AUUGUGUACACUGUGGGUUC GAU GA U
CAAAGUAUUGCAACUAAAC^ C - UA ACUGAC
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Xbo-Mir-12495_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGUGUGAUAUUCAGGGCUAGCCU -23
Get sequence
|
|---|
| Mature sequence |
Xbo-Mir-12495_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AUUAGCUUGGGUGUCACAUGUG -60
Get sequence
|
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