MirGeneDB 3.0

MirGeneDB ID

Tca-Mir-11630

Family name MIR-11630 (all species)
Seed UCAAAUU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-11630
Paralogues
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)
LGX: 3971241-3971303 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGCUGCUCCUGCCAGCUACUGGUCUAUUAGUCAGAUAUGGGUGGAAUGGUGAUGGUAAUCAUGAACACCCAUCAAAUUCAGUUAUGUCUGGCUGGAUACCAGUCUAUGACACAAUGCACGGCA
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Structure
        10           20        30        40        50        60  
CGCUGCUCCUGCCAGCU---|     CUA              G    AUGG      UAAUCA 
                    ACUGGU   UUAGUCAGAUAUGG UGGA    UGAUGG      \
                    UGACCA   GGUCGGUCUGUAUU ACUU    ACUACC      U
ACGGCACGUAACACAGUAUC^     UA-              G    AA--      CACAAG 
 120       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-11630_5p*

mirBase accessionMIMAT0045552
Sequence
0- UCAGAUAUGGGUGGAAUGGUGAUGG -25
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Mature sequence

Tca-Mir-11630_3p

mirBase accessionMIMAT0045553
Sequence
40- AUCAAAUUCAGUUAUGUCUGGCU -63
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