| MirGeneDB ID | Tca-Mir-2765 |
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| Family name |
MIR-2765 (all species) |
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| Seed |
GGUAACU |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-2765
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| Paralogues |
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| Orthologues |
Aae-Mir-2765
Aga-Mir-2765
Bge-Mir-2765
Dlo-Mir-2765
Hme-Mir-2765
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(Tcas5.2) |
LG10: 4187816-4187873 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGUACCGAAAUUCUUGGAUAUAGUGAGGAGUGGUAACUCCACCACCGUUGGCGUGUGUUGUACUGCCAGCGGUCGAGGAGUUCCUUAACCUCGCUGUAAUUCUCCAAAGGACAAGGUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGUACCGAAAUUCUUGGA-- AGU-| U ACC UGUG
UAUAGUGAGG GG AACUCC ACCGUUGGCG U
AUGUCGCUCC CC UUGAGG UGGCGACCGU U
AUGGAACAGGAAACCUCUUA AAUU^ - AGC CAUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut -1 on both arms. |
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Mature sequence |
Tca-Mir-2765_5p |
| mirBase accession | MIMAT0018630 |
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| Sequence |
0- UGGUAACUCCACCACCGUUGGCG -23
Get sequence
|
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| Star sequence |
Tca-Mir-2765_3p* |
| mirBase accession | MIMAT0018631 |
|---|
| Sequence |
35- CCAGCGGUCGAGGAGUUCCUUAA -58
Get sequence
|
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