MirGeneDB 3.0
MirGeneDB ID

Xbo-Mir-12496

Family name MIR-12496 (all species)
Seed UGUGCAU
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID
Paralogues
Orthologues Hmi-Mir-12496  Sro-Mir-12496-P1  Sro-Mir-12496-P2  Sro-Mir-12496-P3 
Node of Origin (locus) Xenacoelomorpha
Node of Origin (family) Xenacoelomorpha
Genome context
(genome.xe)		 scaffold1007: 24070-24129 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAAGUGACACCGGAUGUUGGAUGUGAUUCGCCGCUGUUGAAUGACGCAACAUGAUAUACAGAAUGUUGUGCAUACAAUAGCGGUCGGGUCUAAUCCAUCACGUGACAACACACAGACC
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Structure
        10          20        30         40        50         
AGGAAGUGACACCGGAU-- U     GU      -|        A   A       UGAUA 
                   G UGGAU  GAUUCG CCGCUGUUG AUG CGCAACA     U
                   C ACCUA  CUGGGC GGCGAUAAC UAC GUGUUGU     A
CCAGACACACAACAGUGCA U     AU      U^        A   -       AAGAC 
.       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
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Star sequence

Xbo-Mir-12496_5p*
mirBase accessionNone
Sequence 
0- CGCCGCUGUUGAAUGACGCAACA -23
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Mature sequence

Xbo-Mir-12496_3p
mirBase accessionNone
Sequence 
37- UUGUGCAUACAAUAGCGGUCGGG -60
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