MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-12484-P2-v2

Family name MIR-12484 (all species)
Seed GGGAUCU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-12484-P1-v1  Xla-Mir-12484-P1-v2  Xla-Mir-12484-P2-v1 
Orthologues Xtr-Mir-12484 
Node of Origin (locus) X. laevis
Node of Origin (family) Xenopus
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030734.1: 50543270-50543325 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGACUGGAUCGCCGUUUCUCUGUCUCACACAGGGAUCUCGUGAUGCCGGCAAUGAAAGGCAUGUUCCGGCAUUGCGCAAUCCCAGUGUGAUGCAGGGGAUUUCUACAUGAUGAAUC
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Structure
        10          20        30        40        50       
UGACUGGAUCGCCGUUU--|     C      A     CU  UG       CAAUGAA 
                   CUCUGU UCACAC GGGAU  CG  AUGCCGG       A
                   GGGACG AGUGUG CCCUA  GC  UACGGCC       G
CUAAGUAGUACAUCUUUAG^     U      A     AC  GU       UUGUACG 
    110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-12484-P2-v2_5p
mirBase accessionNone
Sequence 
0- AGGGAUCUCGUGAUGCCGGCAA -22
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Star sequence

Xla-Mir-12484-P2-v2_3p*
mirBase accessionNone
Sequence 
34- UCCGGCAUUGCGCAAUCCCAGU -56
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