Mir
Gene
DB
3.0
Home
Browse
Search
Download
Information
39 microRNA genes with seed CACCUCC
Sort by genome coordinates
Motifs
MirGeneDB ID
▼
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Xtr-Mir-1306
None
MIR-1306
CACCUCC
None
None
chr1
146833450
146833510
+
Gnathostomata
Gnathostomata
Unknown
1
1
Tni-Mir-1306
None
MIR-1306
CACCUCC
None
None
12
10862462
10862522
-
Gnathostomata
Gnathostomata
Yes
1
Tgu-Mir-1306
None
MIR-1306
CACCUCC
None
None
15
7174840
7174900
+
Gnathostomata
Gnathostomata
Yes
1
1
Sto-Mir-1306
None
MIR-1306
CACCUCC
None
None
BFAA01020415.1
2727
2787
+
Gnathostomata
Gnathostomata
Unknown
1
1
Spt-Mir-1306
None
MIR-1306
CACCUCC
None
None
QEPC01011180.1
2305785
2305845
-
Gnathostomata
Gnathostomata
Unknown
1
1
Sha-Mir-1306
None
MIR-1306
CACCUCC
None
None
GL842746.1
50445
50505
-
Gnathostomata
Gnathostomata
Unknown
1
1
Rno-Mir-1306
rno-mir-1306
MIR-1306
CACCUCC
MIMAT0024851
MIMAT0024852
chr11
86857641
86857701
+
Gnathostomata
Gnathostomata
Yes
1
1
Pbv-Mir-1306
pbv-mir-1306
MIR-1306
CACCUCC
None
MIMAT0039074
KE953903.1
109152
109212
+
Gnathostomata
Gnathostomata
Unknown
1
1
Pab-Mir-1306
None
MIR-1306
CACCUCC
None
None
CM068844.1
28007379
28007439
-
Gnathostomata
Gnathostomata
Unknown
1
1
Ocu-Mir-1306
None
MIR-1306
CACCUCC
None
None
chrUn0128
646580
646640
-
Gnathostomata
Gnathostomata
Yes
1
1
Oan-Mir-1306
None
MIR-1306
CACCUCC
None
None
NC_041748.1
24074222
24074282
+
Gnathostomata
Gnathostomata
Unknown
1
1
Mun-Mir-1306
None
MIR-1306
CACCUCC
None
None
1306_LR594642.1:54461610-54461750
41
101
-
Gnathostomata
Gnathostomata
Yes
1
1
Mmu-Mir-1306
mmu-mir-1306
MIR-1306
CACCUCC
MIMAT0019136
MIMAT0009411
chr16
18284248
18284308
-
Gnathostomata
Gnathostomata
Yes
1
1
Mmr-Mir-1306
None
MIR-1306
CACCUCC
None
None
KV890137.1
2438785
2438845
+
Gnathostomata
Gnathostomata
Yes
1
1
Mml-Mir-1306
mml-mir-1306
MIR-1306
CACCUCC
MIMAT0028240
MIMAT0028241
CM014345.1
32546735
32546795
-
Gnathostomata
Gnathostomata
Yes
1
1
Mdo-Mir-1306
mdo-mir-1306
MIR-1306
CACCUCC
MIMAT0050231
MIMAT0050232
3
510012158
510012218
-
Gnathostomata
Gnathostomata
Unknown
1
1
Mal-Mir-1306
None
MIR-1306
CACCUCC
None
None
KV884700.1
821912
821972
-
Gnathostomata
Gnathostomata
Unknown
1
Loc-Mir-1306
None
MIR-1306
CACCUCC
None
None
LG20
2491978
2492038
+
Gnathostomata
Gnathostomata
Unknown
1
1
Lch-Mir-1306
None
MIR-1306
CACCUCC
None
None
JH126620.1
2119645
2119705
+
Gnathostomata
Gnathostomata
Unknown
1
1
Laf-Mir-1306
None
MIR-1306
CACCUCC
None
None
GL010095.1
11519771
11519831
+
Gnathostomata
Gnathostomata
Yes
1
Hsa-Mir-1306
hsa-mir-1306
MIR-1306
CACCUCC
MIMAT0022726
MIMAT0005950
chr22
20086072
20086132
+
Gnathostomata
Gnathostomata
Yes
1
1
Gmo-Mir-1306
None
MIR-1306
CACCUCC
None
None
GeneScaffold_2538
813263
813323
-
Gnathostomata
Gnathostomata
Unknown
1
1
Gja-Mir-1306
None
MIR-1306
CACCUCC
None
None
NW_015174276.1
1689744
1689804
-
Gnathostomata
Gnathostomata
Yes
1
1
Gga-Mir-1306
gga-mir-1306
MIR-1306
CACCUCC
MIMAT0026763
MIMAT0007329
15
1583112
1583172
+
Gnathostomata
Gnathostomata
Yes
1
1
Ete-Mir-1306
None
MIR-1306
CACCUCC
None
None
JH980301
71846469
71846529
-
Gnathostomata
Gnathostomata
Yes
1
1
Eca-Mir-1306
None
MIR-1306
CACCUCC
None
None
CM009155.1
278761
278821
-
Gnathostomata
Gnathostomata
Yes
1
1
Dre-Mir-1306
dre-mir-1306
MIR-1306
CACCUCC
MIMAT0028210
None
chr5
24521686
24521746
+
Gnathostomata
Gnathostomata
Yes
1
1
Dno-Mir-1306
None
MIR-1306
CACCUCC
None
None
JH574166
92657
92717
+
Gnathostomata
Gnathostomata
Unknown
1
1
Cpo-Mir-1306
None
MIR-1306
CACCUCC
None
None
scaffold_4
19154982
19155042
+
Gnathostomata
Gnathostomata
Yes
1
1
Cpi-Mir-1306
None
MIR-1306
CACCUCC
None
None
JH584650
4571132
4571192
+
Gnathostomata
Gnathostomata
Yes
1
1
Cmi-Mir-1306
None
MIR-1306
CACCUCC
None
None
KI635945.1
1148976
1149036
-
Gnathostomata
Gnathostomata
Yes
1
1
Cli-Mir-1306
None
MIR-1306
CACCUCC
None
None
scaffold20
625489
625549
+
Gnathostomata
Gnathostomata
Unknown
1
1
Cja-Mir-1306
None
MIR-1306
CACCUCC
None
None
CM021915.1
209304919
209304979
+
Gnathostomata
Gnathostomata
Yes
1
1
Cfa-Mir-1306
cfa-mir-1306
MIR-1306
CACCUCC
MIMAT0006661
None
chr26
29255668
29255728
-
Gnathostomata
Gnathostomata
Yes
1
1
Bta-Mir-1306
bta-mir-1306
MIR-1306
CACCUCC
MIMAT0009974
None
NC_037344.1
72976118
72976178
+
Gnathostomata
Gnathostomata
Yes
1
1
Ami-Mir-1306
None
MIR-1306
CACCUCC
None
None
NW_017709599.1
1828177
1828237
+
Gnathostomata
Gnathostomata
Unknown
1
1
Aca-Mir-1306
aca-mir-1306
MIR-1306
CACCUCC
None
MIMAT0021738
GL343364.1
1070720
1070780
-
Gnathostomata
Gnathostomata
Yes
1
1
Xla-Mir-1306-P1a
None
MIR-1306
CACCUCC
None
None
NC_030724.1
155449752
155449812
+
X. laevis
Gnathostomata
Unknown
1
1
Xla-Mir-1306-P1b
None
MIR-1306
CACCUCC
None
None
NC_030724.1
155490167
155490227
+
X. laevis
Gnathostomata
Unknown
1
1
Download sequences for:
precursor
|
5p
|
3p
|
mature
|
star
|
mature/star
|
loop
|
extend_pre
|
all