MirGeneDB 3.0

4 Alligator mississippiensis microRNA genes with seed UUGGUCC (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Ami-Mir-133-P1-v1 ami-mir-133a-1 MIR-133 UUGGUCC MIMAT0038146 MIMAT0038147 NW_017707644.1 127279 127338 - Gnathostomata Bilateria No 1
Ami-Mir-133-P2-v1 ami-mir-133b MIR-133 UUGGUCC None MIMAT0038148 NW_017710918.1 2019343 2019401 + Gnathostomata Bilateria No 1 1
Ami-Mir-133-P3-v1 ami-mir-133a-2 MIR-133 UUGGUCC MIMAT0038146 MIMAT0038147 NW_017708899.1 1695335 1695394 - Gnathostomata Bilateria No
Ami-Mir-133-P4-v1 ami-mir-133a-3 MIR-133 UUGGUCC None MIMAT0038147 NW_017707671.1 2163887 2163944 - Gnathostomata Bilateria No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix