MirGeneDB 3.0

4 Danio rerio microRNA genes with seed ACAGUAG (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Br Br Em Ey Gu Gu He Li Li Ov Te
Dre-Mir-199-P1a-v2 dre-mir-199-1 MIR-199 ACAGUAG MIMAT0001277 MIMAT0003155 chr20 14875474 14875534 + Clupeocephala Vertebrata No 1
Dre-Mir-199-P2a-v2 dre-mir-199-2 MIR-199 ACAGUAG MIMAT0001277 MIMAT0003155 chr5 1376779 1376839 - Clupeocephala Vertebrata No
Dre-Mir-199-P2b-v2 None MIR-199 ACAGUAG None None chr5 63709623 63709683 - Clupeocephala Vertebrata No
Dre-Mir-199-P3-v2 dre-mir-199-3 MIR-199 ACAGUAG MIMAT0001277 MIMAT0031922 chr3 47195159 47195219 - Gnathostomata Vertebrata No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix