MirGeneDB 3.0

5 Echinococcus granulosus microRNA genes with seed GGCGCUU (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Egr-Mir-2160-P2a egr-mir-10229a MIR-2160 GGCGCUU MIMAT0041189 MIMAT0041190 APAU02000041.1 53907 53961 - E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P2b egr-mir-10229b MIR-2160 GGCGCUU MIMAT0041199 MIMAT0041200 APAU02000041.1 53714 53776 - E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P3 egr-mir-10227c MIR-2160 GGCGCUU MIMAT0041201 MIMAT0041202 APAU02000041.1 46431 46487 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P4 egr-mir-10227a MIR-2160 GGCGCUU MIMAT0041179 MIMAT0041180 APAU02000041.1 52255 52311 + E. granulosus Platyhelminthes Unknown 1
Egr-Mir-2160-P5 egr-mir-10227e MIR-2160 GGCGCUU MIMAT0041245 MIMAT0041246 APAU02000041.1 46714 46770 + E. granulosus Platyhelminthes Unknown 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix