MirGeneDB 3.0

4 Xenopus laevis microRNA genes with seed CCAGCAU (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Em
Xla-Mir-338-P1a None MIR-338 CCAGCAU None None NC_030740.1 99893009 99893068 - X. laevis Vertebrata No 1 1 1
Xla-Mir-338-P1b xla-mir-338 MIR-338 CCAGCAU MIMAT0046578 MIMAT0046579 NC_030741.1 89723910 89723969 - X. laevis Vertebrata No 1 1 1
Xla-Mir-338-P2c None MIR-338 ACAAUAU None None NC_030740.1 22348510 22348570 + X. laevis Vertebrata No 1
Xla-Mir-338-P2d None MIR-338 ACAAUAU None None NC_030741.1 22008109 22008169 - X. laevis Vertebrata No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix