MirGeneDB ID | Adi-Mir-2036 |
Family name |
MIR-2036 (all species) |
Seed |
AUAUUGU |
Species |
Stony coral (Acropora digitifera) |
MiRBase ID |
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Paralogues |
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Orthologues |
Asp-Mir-2036
Nve-Mir-2036
|
Node of Origin (locus) |
Hexacorallia
|
Node of Origin (family) |
Hexacorallia
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Genome context (GCA_000222465.2_Adig_1.1_genomic) |
DF970697.1: 172423-172476 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUACGGAUGAAGAAAUUUUGUCUCUAAAGGCGGUGAAAGUCGUUUCAAUACACAUUUGAUGUAUAUUGUACGACUCUCAUCGUGUUUGAGGCAAUUACUUGAAUCACCUUACAU
Get precursor sequence
|
Structure | 10 20 30 40 50
UUACGGAUGAAGAAAUU---| U G A UU C UU
UUGUCUC AAA GCGGUGA AGUCGU CAAUA ACA \
AACGGAG UUU UGCUACU UCAGCA GUUAU UGU U
UACAUUCCACUAAGUUCAUU^ - G C U- A AG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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Star sequence |
Adi-Mir-2036_5p* |
mirBase accession | None |
Sequence |
0- CGGUGAAAGUCGUUUCAAUACACA -24
Get sequence
|
Mature sequence |
Adi-Mir-2036_3p |
mirBase accession | None |
Sequence |
31- UAUAUUGUACGACUCUCAUCGUG -54
Get sequence
|