| MirGeneDB ID | Nve-Mir-2036 |
|---|
| Family name |
MIR-2036 (all species) |
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| Seed |
AUAUUGU |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-2036
|
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| Paralogues |
|
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| Orthologues |
Adi-Mir-2036
Asp-Mir-2036
|
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| Node of Origin (locus) |
Hexacorallia
|
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| Node of Origin (family) |
Hexacorallia
|
|---|
Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834390.1: 1097580-1097634 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUCAGAUGCAAUAAGAGUCGUGCCAGGACCCGGUGAGAACGUACAGUAAGCACUUGACGAUGUAUAUUGUACGACUCUCAUCGUAUCCUGCACGGCAAUGAACACGGAACAUGAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUCAGAUGCAAUAAGAG---| C CC A- A CUU
UCGUGC AGGA CGGUGAGA CGUACAGUA GCA G
GGCACG UCCU GCUACUCU GCAUGUUAU UGU A
UAGUACAAGGCACAAGUAAC^ - AU CA A AGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Nve-Mir-2036_5p* |
| mirBase accession | MIMAT0009794 |
|---|
| Sequence |
0- CGGUGAGAACGUACAGUAAGCA -22
Get sequence
|
|---|
| Mature sequence |
Nve-Mir-2036_3p |
| mirBase accession | MIMAT0009795 |
|---|
| Sequence |
32- UAUAUUGUACGACUCUCAUCGUA -55
Get sequence
|
|---|
