| MirGeneDB ID | Asp-Mir-2036 |
|---|
| Family name |
MIR-2036 (all species) |
|---|
| Seed |
AUAUUGU |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Adi-Mir-2036
Nve-Mir-2036
|
|---|
| Node of Origin (locus) |
Hexacorallia
|
|---|
| Node of Origin (family) |
Hexacorallia
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010000853.1: 18238458-18238510 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAAGUGGAACCUCUAAGUCGUGUCAGAAUUCGGUGAGUGUGUACAGUACGCACUGGAAUGUAUAUUGUACGACUCUCAUCGUAUUCUGUACGAAAUUUCCCCGACGCCGGCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAGUGGAACCUCUAAG---| U U U - CG CU
UCGUG CAGAAU CGGUGAG GU GUACAGUA CA G
AGCAU GUCUUA GCUACUC CA CAUGUUAU GU G
AACGGCCGCAGCCCCUUUAA^ - U U G AU AA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Asp-Mir-2036_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGGUGAGUGUGUACAGUACGCA -22
Get sequence
|
|---|
| Mature sequence |
Asp-Mir-2036_3p |
| mirBase accession | None |
|---|
| Sequence |
30- UAUAUUGUACGACUCUCAUCGUA -53
Get sequence
|
|---|
