| MirGeneDB ID | Adi-Mir-2050 |
|---|
| Family name |
MIR-2050 (all species) |
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| Seed |
UUGAUUG |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Asp-Mir-2050
Nve-Mir-2050
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| Node of Origin (locus) |
Hexacorallia
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| Node of Origin (family) |
Hexacorallia
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF971178.1: 83954-84007 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUUAGAAUGUUACAGCAAGGGUUGGAGGUUACCAGACCCCUGCAAUCAAAGAGCUUUUUGUCUUUGAUUGCUGUGAUCUGGUUAUCUCGACUUCUUAACAACGAUUUGUAAAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUAGAAUGUUACAGCAA---| G U CCCCU GCU
GGGUUG AGGU ACCAGA GCAAUCAAAGA U
UUCAGC UCUA UGGUCU CGUUAGUUUCU U
AAAAAUGUUUAGCAACAAUUC^ - U AGUGU GUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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| Star sequence |
Adi-Mir-2050_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACCAGACCCCUGCAAUCAAAGA -22
Get sequence
|
|---|
| Mature sequence |
Adi-Mir-2050_3p |
| mirBase accession | None |
|---|
| Sequence |
32- UUUGAUUGCUGUGAUCUGGUUA -54
Get sequence
|
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