| MirGeneDB ID | Asp-Mir-2050 |
|---|
| Family name |
MIR-2050 (all species) |
|---|
| Seed |
UUUGAUU |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Adi-Mir-2050
Nve-Mir-2050
|
|---|
| Node of Origin (locus) |
Hexacorallia
|
|---|
| Node of Origin (family) |
Hexacorallia
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001589.1: 93460247-93460300 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AGAAGCCAGGCCUACAGAACAGUCCAGACAUCCGGGUCCCAGCCAUCAAAAGUUUUGCCACAUUUGAUUGCUGUGAUCUGGUUUUCUGUUCUAUUAACGAAGGCUAUAUCCUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGAAGCCAGGCCUACAGAAC--| UC CAU C C A UU
AG CAGA CCGGGUC CAGC AUCAAA GU U
UC GUCU GGUCUAG GUCG UAGUUU CA G
AGUCCUAUAUCGGAAGCAAUUA^ UU UUU U U A CC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Asp-Mir-2050_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCCGGGUCCCAGCCAUCAAAAGU -23
Get sequence
|
|---|
| Mature sequence |
Asp-Mir-2050_3p |
| mirBase accession | None |
|---|
| Sequence |
31- AUUUGAUUGCUGUGAUCUGGUUU -54
Get sequence
|
|---|
