MirGeneDB 3.0

MirGeneDB ID

Nve-Mir-2050

Family name MIR-2050 (all species)
Seed UUUGAUU
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-2050
Paralogues
Orthologues Adi-Mir-2050  Asp-Mir-2050 
Node of Origin (locus) Hexacorallia
Node of Origin (family) Hexacorallia
Genome context
(GCF_000209225.1_ASM20922v1_NVE)
NW_001834401.1: 1048129-1048182 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAACCUCGGUCAUUUCAUGGCGCGAGAACCCGGGUCCCAGUCAUCAAACGUCAUUGCACAUUUGAUUGCUGUGAUCUGGUUUUCCGUGUCGAUGUAUAACAGGGAAAAGGUG
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Structure
        10         20         30        40        50      
UAGAACCUCGGUCAUUU-   -|     AG  C       C    C      C  CA 
                  CAU GGCGCG  AA CCGGGUC CAGU AUCAAA GU  U
                  GUA CUGUGC  UU GGUCUAG GUCG UAGUUU CA  U
GUGGAAAAGGGACAAUAU   G^     CU  U       U    U      A  CG 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Bl Ju La Pr
Star sequence

Nve-Mir-2050_5p*

mirBase accessionMIMAT0009824
Sequence
0- CCCGGGUCCCAGUCAUCAAACGU -23
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Mature sequence

Nve-Mir-2050_3p

mirBase accessionMIMAT0009825
Sequence
31- AUUUGAUUGCUGUGAUCUGGUUU -54
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