| MirGeneDB ID | Asp-Mir-2028-P2b |
|---|
| Family name |
MIR-2028 (all species) |
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| Seed |
AAUGUUC |
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| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
|---|
| Paralogues |
Asp-Mir-2028-P1
Asp-Mir-2028-P2a
|
|---|
| Orthologues |
Nve-Mir-2028
|
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| Node of Origin (locus) |
Actinernus sp.
|
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| Node of Origin (family) |
Anenthemonae
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001501.1: 62912200-62912248 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAUGGAGGAUGUGGCAGACUUUGGAGCGCAAAUGUUCCUGCUUGUUCCUGUUUAUUAGAAACAAGCAGAAACGUUUGCAUUACAAUAGUCACUAUUCAGAAGGACACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAUGGAGGAUGUGGCA- -| GAGC C C UU
GACU UUG GCAAAUGUU CUGCUUGUU CUG \
CUGA AAC CGUUUGCAA GACGAACAA GAU U
GCACAGGAAGACUUAUCA U^ AUUA A A UA
100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Asp-Mir-2028-P2b_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAAUGUUCCUGCUUGUUCCUG -21
Get sequence
|
|---|
| Star sequence |
Asp-Mir-2028-P2b_3p* |
| mirBase accession | None |
|---|
| Sequence |
28- GAAACAAGCAGAAACGUUUGC -49
Get sequence
|
|---|
