| MirGeneDB ID | Asp-Novel-4-P1 |
|---|
| Family name |
ASP-NOVEL-4 (all species) |
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| Seed |
GUUGAGA |
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| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
|
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| Paralogues |
Asp-Novel-4-P2
Asp-Novel-4-P3
|
|---|
| Orthologues |
|
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| Node of Origin (locus) |
Actinernus sp.
|
|---|
| Node of Origin (family) |
Actinernus sp.
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001210.1: 39417262-39417317 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUAUGUUUCUCUUGUUGUCGAGGCUUUGAGAGUUGAGACGCAAACAUGAAUUUCUUGUUUUAAUUCAUUUUCGCGUCUCGACCCUCUCAAAGCUGUUUUCUAUUCAAUAUACACCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAUGUUUCUCUUGUUGUCGA- --| A C UCUU
GGCUUUGAGA GUUGAGACGC AA AUGAAUU \
UCGAAACUCU CAGCUCUGCG UU UACUUAA G
UCCACAUAUAACUUAUCUUUUG CC^ C U UUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Asp-Novel-4-P1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUGAGACGCAAACAUGAAUU -22
Get sequence
|
|---|
| Star sequence |
Asp-Novel-4-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- UUCAUUUUCGCGUCUCGACCCUC -56
Get sequence
|
|---|
