| MirGeneDB ID | Asp-Novel-4-P3 |
|---|
| Family name |
ASP-NOVEL-4 (all species) |
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| Seed |
GUUGAGA |
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| Species |
Deep-sea anemone (Actinernus sp.) |
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| MiRBase ID |
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| Paralogues |
Asp-Novel-4-P1
Asp-Novel-4-P2
|
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| Orthologues |
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| Node of Origin (locus) |
Actinernus sp.
|
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| Node of Origin (family) |
Actinernus sp.
|
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Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001210.1: 39380616-39380671 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUAUGUUUCUCUUGUUGUCGAAGAUUUGGAAGUUGAGACGCAAACAUGAAUUUGUUGUUUUAAUUCAUUUUCGCGUCUCGACCCUCUCAAAGCUGUUUUCUAUUCAAUAUACACCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAUGUUUCUCUUGUUGUCGA- A - A-| A C UGUU
AG UUUG GA GUUGAGACGC AA AUGAAUU \
UC AAAC CU CAGCUCUGCG UU UACUUAA G
UCCACAUAUAACUUAUCUUUUG G U CC^ C U UUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Asp-Novel-4-P3_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUGAGACGCAAACAUGAAUU -22
Get sequence
|
|---|
| Star sequence |
Asp-Novel-4-P3_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- UUCAUUUUCGCGUCUCGACCCUC -56
Get sequence
|
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