MirGeneDB 3.0

MirGeneDB ID

Asp-Novel-4-P2

Family name ASP-NOVEL-4 (all species)
Seed GUUGAGA
Species Deep-sea anemone (Actinernus sp.)
MiRBase ID
Paralogues Asp-Novel-4-P1  Asp-Novel-4-P3 
Orthologues
Node of Origin (locus) Actinernus sp.
Node of Origin (family) Actinernus sp.
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic)
JAOWCC010001210.1: 39410679-39410735 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGACGGCACCGUUGUUGUCGAAGCUUUGAGAGUUGAGACGCAAACAUGAAUUUCUUGUUGUAAUUCAUAUUCGCUUCUCGACACUCUCAAAGCUGUUUUCUAUUCAAUAUACACCUG
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Structure
        10        20          30          40        50       
UGACGGCACCGUUGUUGUCGA--            --|    C  A  C       UCUU 
                       AGCUUUGAGAGU  UGAGA GC AA AUGAAUU    \
                       UCGAAACUCUCA  GCUCU CG UU UACUUAA    G
GUCCACAUAUAACUUAUCUUUUG            CA^    U  C  A       UGUU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Sr Sr Sr Sr
Mature sequence

Asp-Novel-4-P2_5p

mirBase accessionNone
Sequence
0- AGUUGAGACGCAAACAUGAAUU -22
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Star sequence

Asp-Novel-4-P2_3p*

mirBase accessionNone
Sequence
33- UUCAUAUUCGCUUCUCGACACUCU -57
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