MirGeneDB ID | Asp-Novel-4-P2 |
Family name |
ASP-NOVEL-4 (all species) |
Seed |
GUUGAGA |
Species |
Deep-sea anemone (Actinernus sp.) |
MiRBase ID |
|
Paralogues |
Asp-Novel-4-P1
Asp-Novel-4-P3
|
Orthologues |
|
Node of Origin (locus) |
Actinernus sp.
|
Node of Origin (family) |
Actinernus sp.
|
Genome context (GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001210.1: 39410679-39410735 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGACGGCACCGUUGUUGUCGAAGCUUUGAGAGUUGAGACGCAAACAUGAAUUUCUUGUUGUAAUUCAUAUUCGCUUCUCGACACUCUCAAAGCUGUUUUCUAUUCAAUAUACACCUG
Get precursor sequence
|
Structure | 10 20 30 40 50
UGACGGCACCGUUGUUGUCGA-- --| C A C UCUU
AGCUUUGAGAGU UGAGA GC AA AUGAAUU \
UCGAAACUCUCA GCUCU CG UU UACUUAA G
GUCCACAUAUAACUUAUCUUUUG CA^ U C A UGUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Asp-Novel-4-P2_5p |
mirBase accession | None |
Sequence |
0- AGUUGAGACGCAAACAUGAAUU -22
Get sequence
|
Star sequence |
Asp-Novel-4-P2_3p* |
mirBase accession | None |
Sequence |
33- UUCAUAUUCGCUUCUCGACACUCU -57
Get sequence
|