MirGeneDB 2.1
MirGeneDB ID

Asu-Let-7-P6

Family name LET-7 (all species)
Seed GAGGUAG
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-84
Paralogues Asu-Let-7-P5 
Orthologues Aae-Let-7  Bge-Let-7  Bpl-Let-7  Cbr-Let-7-P6  Cel-Let-7-P6  Cgi-Let-7  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7 
Node of Origin (locus) Chromadorea
Node of Origin (family) Bilateria
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold22: 2606662-2606720 [+]
Precursor
(pre-Mir +30nt flank)
UUGACGAGUUGGGCAAACUCUAAAGGCCGAUGAGGUAGUUUAUAAAGCUGCGAGUGUGUUUUCCUUCGCAGAUUUUAGGCUAUCUCGACAGCCUUGAUCAAUGCCUUCCCCACUCCUCU
Get precursor sequence
Structure
        10        20          30        40        50         
UUGACGAGUUGGGCAAACUCUA--|    CGA            UAAAG      GUGUG 
                        AAGGC   UGAGGUAGUUUA     CUGCGA     U
                        UUCCG   GCUCUAUCGGAU     GACGCU     U
UCUCCUCACCCCUUCCGUAACUAG^    ACA            UUUA-      UCCUU 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
0h 11 12 24 46 64 6d 7d 8d 96 Em La Ov Se Sp Te Zy
Mature sequence

Asu-Let-7-P6_5p
mirBase accessionMIMAT0021477
Sequence 
0- UGAGGUAGUUUAUAAAGCUGCGA -23
Get sequence
Co-mature sequence

Asu-Let-7-P6_3p
mirBase accessionMIMAT0021478
Sequence 
37- GCAGAUUUUAGGCUAUCUCGAC -59
Get sequence