MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-9-P34

Family name MIR-9 (all species)
Seed CUUUGGU
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-9-P33 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) A. vaga
Node of Origin (family) Bilateria
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075496.1: 13241633-13241695 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUAAAAUGAAAUACUUGAUCGAGUUGUCUCUUUGGUAUUCAAUCUCUAUGACUGUUUAGUUUAAUCUCAUAAAGCUUGAAUACCGGAGGAUGACUCGAACAAAAAGAUAAUCAUGAAUUUA
Get precursor sequence
Structure
        10           20        30        40        50        60 
AUAUAAAAUGAAAUACU---| A      UG  U             U  C     CUGUUUA 
                    UG UCGAGU  UC CUUUGGUAUUCAA CU UAUGA       \
                    AC AGCUCA  AG GAGGCCAUAAGUU GA AUACU       G
AUUUAAGUACUAAUAGAAAA^ A      GU  -             C  A     CUAAUUU 
 120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To To
Mature sequence

Ava-Mir-9-P34_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUAUUCAAUCUCUAUGA -23
Get sequence
Co-mature sequence

Ava-Mir-9-P34_3p
mirBase accessionNone
Sequence 
40- AUAAAGCUUGAAUACCGGAGGAU -63
Get sequence