MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-10-P10

Family name MIR-10 (all species)
Seed ACCCUGU
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Bla-Mir-10-P2-v1  Bla-Mir-10-P2-v2  Bla-Mir-10-P3  Bla-Mir-10-P9 
Orthologues Adi-Mir-10  Asp-Mir-10  Bfl-Mir-10-P10  Nve-Mir-10 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Eumetazoa
Genome context
(BraLan2)		 Sc0000000: 1938275-1938334 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCAUGAAUACGUUUUAGUGGUCCAUAUGAACCCUGUGGAUCCGAUCUUGUGUCGCUAUAAAAACCGCAAGGCUGGAUCGACAGGUUCAUAUAGAGCACGAUCAGCAUCCGCACCCUCG
Get precursor sequence
Structure
        10          20        30        40        50          
UGGCAUGAAUACGUUUUA--|  G  C         C   G      AU      UCGCUA 
                    GUG UC AUAUGAACC UGU GAUCCG  CUUGUG      \
                    CAC AG UAUACUUGG ACA CUAGGU  GAACGC      U
GCUCCCACGCCUACGACUAG^  G  A         -   G      CG      CAAAAA 
.       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Em Em Em Em
Mature sequence

Bla-Mir-10-P10_5p
mirBase accessionNone
Sequence 
0- AACCCUGUGGAUCCGAUCUUGUG -23
Get sequence
Star sequence

Bla-Mir-10-P10_3p*
mirBase accessionNone
Sequence 
38- CAAGGCUGGAUCGACAGGUUCA -60
Get sequence