MirGeneDB 3.0

MirGeneDB ID

Bfl-Mir-10-P10

Family name MIR-10 (all species)
Seed ACCCUGU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-10b
Paralogues Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bfl-Mir-10-P2-v1  Bfl-Mir-10-P2-v2  Bfl-Mir-10-P3  Bfl-Mir-10-P9 
Orthologues Adi-Mir-10  Asp-Mir-10  Bla-Mir-10-P10  Nve-Mir-10 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Eumetazoa
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)
Bf_V2_12:883000-883500: 17-77 [+] UCSC
Precursor
(pre-Mir +30nt flank)
AACCCUGUGGAUCCGAUCUUGUGUCGCUAUAAAAACCACAAGGUGGGACUGACAGGUUCAU
Get precursor sequence
Structure
           10        20          
AAC--     -| A   G        UCGCUA 
     CCUGU GG UCC AUCUUGUG      \
     GGACA UC AGG UGGAACAC      U
UACUU     G^ -   G        CAAAAA 
60        50         40
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Bfl-Mir-10-P10_5p

mirBase accessionMIMAT0009468
Sequence
0- AACCCUGUGGAUCCGAUCUUGUG -23
Get sequence
Star sequence

Bfl-Mir-10-P10_3p* (predicted)

mirBase accessionNone
Sequence
38- CAAGGUGGGACUGACAGGUUCAU -61
Get sequence