| MirGeneDB ID | Bfl-Mir-10-P10 |
|---|---|
| Family name | MIR-10 (all species) |
| Seed | ACCCUGU |
| Species | Florida lancelet (Branchiostoma floridae) |
| MiRBase ID | bfl-mir-10b |
| Paralogues | Bfl-Mir-10-P1-v1 Bfl-Mir-10-P1-v2 Bfl-Mir-10-P2-v1 Bfl-Mir-10-P2-v2 Bfl-Mir-10-P3 Bfl-Mir-10-P9 |
| Orthologues | Adi-Mir-10 Asp-Mir-10 Bla-Mir-10-P10 Nve-Mir-10 |
| Node of Origin (locus) | Branchiostoma |
| Node of Origin (family) | Eumetazoa |
| Genome context (GCF_000003815.2_Bfl_VNyyK_genomic) |
Bf_V2_12:883000-883500: 17-77 [+] UCSC |
| Precursor (pre-Mir +30nt flank) | AACCCUGUGGAUCCGAUCUUGUGUCGCUAUAAAAACCACAAGGUGGGACUGACAGGUUCAUGet precursor sequence |
| Structure | 10 20 AAC-- -| A G UCGCUA CCUGU GG UCC AUCUUGUG \ GGACA UC AGG UGGAACAC U UACUU G^ - G CAAAAA 60 50 40 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Bfl-Mir-10-P10_5p |
| mirBase accession | MIMAT0009468 |
| Sequence |
0- AACCCUGUGGAUCCGAUCUUGUG -23
Get sequence
|
| Star sequence | Bfl-Mir-10-P10_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- CAAGGUGGGACUGACAGGUUCAU -61
Get sequence
|
