MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-10-P9

Family name MIR-10 (all species)
Seed ACCCUGU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-10c
Paralogues Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bfl-Mir-10-P2-v1  Bfl-Mir-10-P2-v2  Bfl-Mir-10-P3  Bfl-Mir-10-P10 
Orthologues Adi-Mir-10  Asp-Mir-10  Bla-Mir-10-P9  Nve-Mir-10 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Eumetazoa
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049994.1: 10433249-10433307 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CUGUGAAAAGGACAUGUGGUUCCCCAGGAUUACCCUGUAGAUCCGGACUUGUGGUCACUUCAUCACACAAAUCCGAUUUACAGGAUAGGCCUUGGCAACACCAACCAACGUUACCAUCA
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Structure
        10          20        30        40        50         
CUGUGAAAAGGACAUGUG--|  C  C   A   C          C   C     GUCAC 
                    GUU CC AGG UUA CCUGUAGAUC GGA UUGUG     U
                    CAA GG UCC GAU GGACAUUUAG CCU AACAC     U
ACUACCAUUGCAACCAACCA^  C  U   G   A          -   A     ACUAC 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Bfl-Mir-10-P9_5p
mirBase accessionMIMAT0009469
Sequence 
0- UACCCUGUAGAUCCGGACUUGUG -23
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Star sequence

Bfl-Mir-10-P9_3p* (predicted)
mirBase accessionNone
Sequence 
37- CAAAUCCGAUUUACAGGAUAGG -59
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